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Machine/Deep Learning


Predicting Human Age

Using sc-RNA data, the subject age was predicted by conducting regression analysis using MLP with VAE, NMF and DAE.

Classification of Glioma

Processed gene expression data from TCGA to classify it into different subtypes of Glioma.

Single-cell batch correction using VAE-GAN

Extracting underlying features that causes batch-to-batch variations and using them correct the batch effect.

Reinforcement Learning


A Reinforcement Active Learning Approach to Antibacterial Screening

Predicting potency of small molecules on Burkholderia cenocepacia using active machine learning techniques, using SMILES data.

Bioinformatics


Pipeline for Prediction of Transcription Start Sites

Comparison and improvement of latest TSS prediction pipelines, for better annotation of transcripts.

Key Signatures between Severe Asthma and Lung Cancer

Searching for common gene sets between severe asthma and non-small cell lung cancer in non-smoking patients.

Simulations & Games


[Simulating sequence evolution for in-silico experimentation](https://mirudhula-m.notion.site/Simulating-sequence-evolution-for-in-silico-experimentation-2f155e2ec5884b739ac9130012e4bfe6)

Simulating all steps from whole genome to protein to phenotypic expression to identify the fitness of the individual. Selection and mutation steps were carried out and new set of offsprings were passed to next generation of simulation.

Natural Selection Simulator

A simple game-like simulator for natural selection that can be understood and operated by anyone.

Hit-and-Score Game

90s-like shooting video game where players are required to aim at a moving target and score points.

Web Development


Personal Website

How I created my personal website

Notes on how I created my personal website.